cellrank: Inconsistency in CytoTRACE tutorial
Description
The Schur decomposition in the CytoTRACE tutorial here highlights an eigengap after 5 eigenvalues.
The following text, however, talks about an eigengap after 3 eigenvalues which is supposedly shown in the figure. Am I missing something or do we need to update this @Marius1311, @michalk8?
About this issue
- Original URL
- State: closed
- Created 3 years ago
- Comments: 15 (3 by maintainers)
In the example below, the eigengap would be inferred aver 5 eigenvalues, so you should compute 5 macrostates, as a starting point. Keep in mind the eigengap statistic is a heuristic though, so take this more as a starting point to your analysis.