Viewers: [Bug] Viewing CT and SEG DICOM files in OHIF converted from nifti
Hi,
I have deployed my own viewer app using the https://github.com/ImagingDataCommons/Viewers master branch here. It has been working with no issues – however now I have been working with a different set of files, and have encountered an issue.
I have a nifti CT file that I converted to a DICOM series using the slicer.modules.createdicomseries module. I then converted the associated label nifti file to a DICOM SEG file using dcmqi. When I load these converted DICOM files into Slicer, they load with no visible issues:
However, when I view the same DICOM files in OHIF, the following occurs:
https://github.com/OHIF/Viewers/assets/59979551/030a3aa7-4b3c-4663-8edf-aa9f381314ce
Here are the DICOM CT and SEG files in dropbox.
Thank you,
Deepa
Steps to Reproduce
- Deployed my own viewer app using the https://github.com/ImagingDataCommons/Viewers master branch
- Converted the CT nifti file to DICOM series using
slicer.modules.createdicomseries - Converted the label nifti file to DICOM using
dcmqi - Added DICOM files to a dataset and DICOM datastore and accessed in the deployed viewer
The current behavior
Currently, both the CT and SEG do not load properly:
https://github.com/OHIF/Viewers/assets/59979551/030a3aa7-4b3c-4663-8edf-aa9f381314ce
The expected behavior
It should look something like this:
OS
Windows 10
Node version
I’m not sure
Browser
Chrome 116.0.5845.188
About this issue
- Original URL
- State: open
- Created 9 months ago
- Comments: 15 (13 by maintainers)
Great explanation thanks