silx: [plot gl] ROIs not displayed with solid lines
Might be related to #3595.


Way to reproduce:
- Before running
examples/plotInteractiveImageROI.py, change line https://github.com/silx-kit/silx/blob/1ae49bae6ef218a73b15e555563713bee06ed341/examples/plotInteractiveImageROI.py#L81 toroi.setLineStyle('-'). - Toggle on OpenGL rendering. Or create Plot2D directly with
backend='opengl'
Sometimes the rois still appear with the opengl backend on, but only distorted.
Reproduced:
on Win10, silx 1.0.0 and latest version 1ae49bae6ef218a73b15e555563713bee06ed341. On two machines.
About this issue
- Original URL
- State: closed
- Created 2 years ago
- Comments: 18 (18 by maintainers)
Awesome, I think you’ve got it 👍 I tested the fix on two affected machines and this solves the problem on both of them. Thanks for the support!
Good to hear!
That’s kind of hard to track an issue without reproducing it!
OK, great, Thanks for the testing!
I made some changes in the marker rendering. Not sure it is fixing this issue, but it is worth checking if you don’t mind:
It’s in this branch: https://github.com/t20100/silx/tree/fix-plot-gl This changes can be seen here: https://github.com/silx-kit/silx/compare/master...t20100:silx:fix-plot-gl?expand=1 You can download the corresponding .zip here: https://codeload.github.com/t20100/silx/zip/refs/heads/fix-plot-gl
The issue is also present in version 0.13.0 and 0.13.2.
I made a mistake in the previous comment. I actually switched off the roi (as you can also see in the screenshots) instead of just disabling the edit mode.
As long as no edit markers are on screen, the lines are present regardless of whether I switch on or off the edit mode.
One more hint 😃 The lines reappear, if the markers for dragging of the rois are not on the display.

Changing the line width also does not fix the issue.
Yes, this is the strange part. Everything else seems to work fine.
I will try to install the python environment only with the packages from pypi. Maybe it is related to some other dependency.
test env
Name Version Build Channel _anaconda_depends 2022.05 py38_0 aiohttp 3.8.1 py38h2bbff1b_1 aiosignal 1.2.0 pyhd3eb1b0_0 alabaster 0.7.12 pyhd3eb1b0_0 anaconda custom py38_1 anaconda-client 1.11.0 py38haa95532_0 anaconda-project 0.11.1 py38haa95532_0 anyio 3.5.0 py38haa95532_0 aom 3.5.0 h63175ca_0 conda-forge appdirs 1.4.4 pyhd3eb1b0_0 argon2-cffi 21.3.0 pyhd3eb1b0_0 argon2-cffi-bindings 21.2.0 py38h2bbff1b_0 arrow 1.2.2 pyhd3eb1b0_0 astroid 2.11.7 py38haa95532_0 astropy 5.1 py38h080aedc_0 asttokens 2.0.5 pyhd3eb1b0_0 async-timeout 4.0.1 pyhd3eb1b0_0 atomicwrites 1.4.0 py_0 attrs 21.4.0 pyhd3eb1b0_0 automat 20.2.0 py_0 autopep8 1.6.0 pyhd3eb1b0_1 babel 2.9.1 pyhd3eb1b0_0 backcall 0.2.0 pyhd3eb1b0_0 backports 1.1 pyhd3eb1b0_0 backports.functools_lru_cache 1.6.4 pyhd3eb1b0_0 backports.tempfile 1.0 pyhd3eb1b0_1 backports.weakref 1.0.post1 py_1 bcrypt 3.2.0 py38h2bbff1b_1 beautifulsoup4 4.11.1 py38haa95532_0 binaryornot 0.4.4 pyhd3eb1b0_1 bitarray 2.5.1 py38h2bbff1b_0 bkcharts 0.2 py38haa95532_1 black 22.6.0 py38haa95532_0 blas 1.0 mkl bleach 4.1.0 pyhd3eb1b0_0 blosc 1.21.1 h74325e0_3 conda-forge bokeh 2.4.3 py38haa95532_0 boto3 1.24.28 py38haa95532_0 botocore 1.27.28 py38haa95532_0 bottleneck 1.3.5 py38h080aedc_0 brotli 1.0.9 h2bbff1b_7 brotli-bin 1.0.9 h2bbff1b_7 brotlipy 0.7.0 py38h2bbff1b_1003 bzip2 1.0.8 he774522_0 c-blosc2 2.4.1 h183a6f4_0 conda-forge ca-certificates 2022.07.19 haa95532_0 cachetools 4.2.2 pyhd3eb1b0_0 certifi 2022.9.14 py38haa95532_0 cffi 1.15.1 py38h2bbff1b_0 cfitsio 4.1.0 h5a969a9_0 conda-forge chardet 4.0.0 py38haa95532_1003 charls 2.3.4 h39d44d4_0 conda-forge charset-normalizer 2.0.4 pyhd3eb1b0_0 click 8.0.4 py38haa95532_0 cloudpickle 2.0.0 pyhd3eb1b0_0 clyent 1.2.2 py38_1 colorama 0.4.5 py38haa95532_0 colorcet 3.0.0 py38haa95532_0 comtypes 1.1.10 py38haa95532_1002 conda 22.9.0 py38haa95532_0 conda-content-trust 0.1.3 py38haa95532_0 conda-pack 0.6.0 pyhd3eb1b0_0 conda-package-handling 1.9.0 py38h8cc25b3_0 conda-token 0.4.0 pyhd3eb1b0_0 console_shortcut 0.1.1 4 constantly 15.1.0 pyh2b92418_0 cookiecutter 1.7.3 pyhd3eb1b0_0 cryptography 37.0.1 py38h21b164f_0 cssselect 1.1.0 pyhd3eb1b0_0 curl 7.84.0 h2bbff1b_0 cycler 0.11.0 pyhd3eb1b0_0 cython 0.29.32 py38hd77b12b_0 cytoolz 0.11.0 py38he774522_0 daal4py 2021.5.0 py38h8cb3d55_0 dal 2021.5.0 haa95532_796 dask 2022.2.1 pyhd3eb1b0_0 dask-core 2022.2.1 pyhd3eb1b0_0 dataclasses 0.8 pyh6d0b6a4_7 datashader 0.13.0 pyhd3eb1b0_1 datashape 0.5.4 py38haa95532_1 dav1d 1.0.0 h8ffe710_1 conda-forge debugpy 1.5.1 py38hd77b12b_0 decorator 5.1.1 pyhd3eb1b0_0 defusedxml 0.7.1 pyhd3eb1b0_0 diff-match-patch 20200713 pyhd3eb1b0_0 dill 0.3.4 pyhd3eb1b0_0 distributed 2022.2.1 pyhd3eb1b0_0 docutils 0.18.1 py38haa95532_3 entrypoints 0.4 py38haa95532_0 et_xmlfile 1.1.0 py38haa95532_0 executing 0.8.3 pyhd3eb1b0_0 fabio 0.14.0 pypi_0 pypi filelock 3.6.0 pyhd3eb1b0_0 flake8 4.0.1 pyhd3eb1b0_1 flask 2.1.3 py38haa95532_0 fonttools 4.25.0 pyhd3eb1b0_0 freetype 2.10.4 hd328e21_0 frozenlist 1.2.0 py38h2bbff1b_0 fsspec 2022.7.1 py38haa95532_0 future 0.18.2 py38_1 gensim 4.1.2 py38hd77b12b_0 gettext 0.19.8.1 h5728263_1009 conda-forge giflib 5.2.1 h62dcd97_0 glib 2.74.0 h12be248_0 conda-forge glib-tools 2.74.0 h12be248_0 conda-forge glob2 0.7 pyhd3eb1b0_0 google-api-core 2.10.1 py38haa95532_0 google-auth 2.6.0 pyhd3eb1b0_0 google-cloud-core 2.2.2 pyhd3eb1b0_0 google-cloud-storage 1.43.0 py38haa95532_0 google-crc32c 1.1.2 py38h2bbff1b_0 google-resumable-media 1.3.1 pyhd3eb1b0_1 googleapis-common-protos 1.56.4 py38haa95532_0 greenlet 1.1.1 py38hd77b12b_0 grpcio 1.42.0 py38hc60d5dd_0 gst-plugins-base 1.20.3 h001b923_2 conda-forge gstreamer 1.20.3 h6b5321d_2 conda-forge h5py 2.10.0 py38h5e291fa_0 hdf5 1.10.4 h7ebc959_0 heapdict 1.0.1 pyhd3eb1b0_0 holoviews 1.15.0 py38haa95532_0 hvplot 0.8.0 py38haa95532_0 hyperlink 21.0.0 pyhd3eb1b0_0 icc_rt 2022.1.0 h6049295_1 icu 70.1 h0e60522_0 conda-forge idna 3.3 pyhd3eb1b0_0 imagecodecs 2022.9.26 py38h1fa618c_0 conda-forge imageio 2.19.3 py38haa95532_0 imagesize 1.4.1 py38haa95532_0 importlib-metadata 4.11.3 py38haa95532_0 importlib_metadata 4.11.3 hd3eb1b0_0 importlib_resources 5.2.0 pyhd3eb1b0_1 incremental 21.3.0 pyhd3eb1b0_0 inflection 0.5.1 py38haa95532_0 iniconfig 1.1.1 pyhd3eb1b0_0 intake 0.6.5 pyhd3eb1b0_0 intel-openmp 2022.1.0 h59b6b97_3788 intervaltree 3.1.0 pyhd3eb1b0_0 ipykernel 6.15.2 py38haa95532_0 ipython 7.31.1 py38haa95532_1 ipython_genutils 0.2.0 pyhd3eb1b0_1 ipywidgets 7.6.5 pyhd3eb1b0_1 isort 5.9.3 pyhd3eb1b0_0 itemadapter 0.3.0 pyhd3eb1b0_0 itemloaders 1.0.4 pyhd3eb1b0_1 itsdangerous 2.0.1 pyhd3eb1b0_0 jdcal 1.4.1 pyhd3eb1b0_0 jedi 0.18.1 py38haa95532_1 jellyfish 0.9.0 py38h2bbff1b_0 jinja2 3.0.3 pyhd3eb1b0_0 jinja2-time 0.2.0 pyhd3eb1b0_3 jmespath 0.10.0 pyhd3eb1b0_0 joblib 1.1.0 pyhd3eb1b0_0 jpeg 9e h2bbff1b_0 jq 1.6 haa95532_1 json5 0.9.6 pyhd3eb1b0_0 jsonschema 4.16.0 py38haa95532_0 jupyter 1.0.0 py38haa95532_8 jupyter_client 7.3.5 py38haa95532_0 jupyter_console 6.4.3 pyhd3eb1b0_0 jupyter_core 4.10.0 py38haa95532_0 jupyter_server 1.18.1 py38haa95532_0 jupyterlab 3.4.4 py38haa95532_0 jupyterlab_pygments 0.1.2 py_0 jupyterlab_server 2.12.0 py38haa95532_0 jupyterlab_widgets 1.0.0 pyhd3eb1b0_1 jxrlib 1.1 he774522_2 keyring 23.4.0 py38haa95532_0 kiwisolver 1.4.2 py38hd77b12b_0 krb5 1.19.3 h1176d77_0 conda-forge lazy-object-proxy 1.6.0 py38h2bbff1b_0 lcms2 2.12 h83e58a3_0 lerc 4.0.0 h63175ca_0 conda-forge libaec 1.0.6 h39d44d4_0 conda-forge libarchive 3.6.1 hebabd0d_0 libavif 0.10.1 h8f5c5bc_2 conda-forge libblas 3.9.0 12_win64_mkl conda-forge libbrotlicommon 1.0.9 h2bbff1b_7 libbrotlidec 1.0.9 h2bbff1b_7 libbrotlienc 1.0.9 h2bbff1b_7 libcblas 3.9.0 12_win64_mkl conda-forge libclang 14.0.6 default_hf4acfee_0 libclang13 14.0.6 default_h8992b79_0 libcrc32c 1.1.1 ha925a31_2 libcurl 7.84.0 h86230a5_0 libdeflate 1.14 hcfcfb64_0 conda-forge libffi 3.4.2 hd77b12b_4 libglib 2.74.0 h79619a9_0 conda-forge libiconv 1.17 h8ffe710_0 conda-forge liblapack 3.9.0 12_win64_mkl conda-forge liblief 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pyhd3eb1b0_0 paramiko 2.8.1 pyhd3eb1b0_0 parsel 1.6.0 py38haa95532_0 parso 0.8.3 pyhd3eb1b0_0 partd 1.2.0 pyhd3eb1b0_1 pathspec 0.9.0 py38haa95532_0 patsy 0.5.2 py38haa95532_1 pcre2 10.37 h0ff8eda_1 pep8 1.7.1 py38haa95532_1 pexpect 4.8.0 pyhd3eb1b0_3 pickleshare 0.7.5 pyhd3eb1b0_1003 pillow 9.2.0 py38hdc2b20a_1 pip 22.1.2 py38haa95532_0 pkginfo 1.8.2 pyhd3eb1b0_0 pkgutil-resolve-name 1.3.10 py38haa95532_0 platformdirs 2.5.2 py38haa95532_0 plotly 5.9.0 py38haa95532_0 pluggy 1.0.0 py38haa95532_1 ply 3.11 py38_0 powershell_shortcut 0.0.1 3 poyo 0.5.0 pyhd3eb1b0_0 prometheus_client 0.14.1 py38haa95532_0 prompt-toolkit 3.0.20 pyhd3eb1b0_0 prompt_toolkit 3.0.20 hd3eb1b0_0 protego 0.1.16 py_0 protobuf 3.20.1 py38hd77b12b_0 psutil 5.9.0 py38h2bbff1b_0 ptyprocess 0.7.0 pyhd3eb1b0_2 pure_eval 0.2.2 pyhd3eb1b0_0 py 1.11.0 pyhd3eb1b0_0 py-lief 0.11.5 py38hd77b12b_1 pyasn1 0.4.8 pyhd3eb1b0_0 pyasn1-modules 0.2.8 py_0 pycodestyle 2.8.0 pyhd3eb1b0_0 pycosat 0.6.3 py38h2bbff1b_0 pycparser 2.21 pyhd3eb1b0_0 pyct 0.4.8 py38haa95532_1 pycurl 7.45.1 py38hcd4344a_0 pydispatcher 2.0.5 py38haa95532_2 pydocstyle 6.1.1 pyhd3eb1b0_0 pyerfa 2.0.0 py38h2bbff1b_0 pyflakes 2.4.0 pyhd3eb1b0_0 pygments 2.11.2 pyhd3eb1b0_0 pyhamcrest 2.0.2 pyhd3eb1b0_2 pylint 2.14.5 py38haa95532_0 pyls-spyder 0.4.0 pyhd3eb1b0_0 pynacl 1.5.0 py38h8cc25b3_0 pyodbc 4.0.34 py38hd77b12b_0 pyopengl 3.1.6 pypi_0 pypi pyopengl-accelerate 3.1.6 pypi_0 pypi pyopenssl 22.0.0 pyhd3eb1b0_0 pyparsing 3.0.9 py38haa95532_0 pyqt 5.15.7 py38h75e37d8_0 conda-forge pyqt5-sip 12.11.0 py38h885f38d_0 conda-forge pyqtwebengine 5.15.7 py38h75e37d8_0 conda-forge pyreadline 2.1 py38_1 pyrsistent 0.18.0 py38h196d8e1_0 pysocks 1.7.1 py38haa95532_0 pytables 3.6.1 py38ha5be198_0 pytest 7.1.2 py38haa95532_0 python 3.8.13 h6244533_0 python-dateutil 2.8.2 pyhd3eb1b0_0 python-fastjsonschema 2.16.2 py38haa95532_0 python-libarchive-c 2.9 pyhd3eb1b0_1 python-lsp-black 1.2.1 py38haa95532_0 python-lsp-jsonrpc 1.0.0 pyhd3eb1b0_0 python-lsp-server 1.5.0 py38haa95532_0 python-slugify 5.0.2 pyhd3eb1b0_0 python-snappy 0.6.0 py38hd77b12b_3 python_abi 3.8 2_cp38 conda-forge pytz 2022.1 py38haa95532_0 pyviz_comms 2.0.2 pyhd3eb1b0_0 pywavelets 1.3.0 py38h2bbff1b_0 pywin32 302 py38h2bbff1b_2 pywin32-ctypes 0.2.0 py38_1000 pywinpty 2.0.2 py38h5da7b33_0 pyyaml 6.0 py38h2bbff1b_1 pyzmq 23.2.0 py38hd77b12b_0 qdarkstyle 3.0.2 pyhd3eb1b0_0 qstylizer 0.1.10 pyhd3eb1b0_0 qt 5.15.4 h2d74725_0 conda-forge qt-main 5.15.4 h467ea89_2 conda-forge qt-webengine 5.15.4 h7325c83_3 conda-forge qtawesome 1.0.3 pyhd3eb1b0_0 qtconsole 5.3.2 py38haa95532_0 qtpy 2.2.0 py38haa95532_0 queuelib 1.5.0 py38haa95532_0 regex 2022.7.9 py38h2bbff1b_0 requests 2.28.1 py38haa95532_0 requests-file 1.5.1 pyhd3eb1b0_0 rope 0.22.0 pyhd3eb1b0_0 rsa 4.7.2 pyhd3eb1b0_1 rtree 0.9.7 py38h2eaa2aa_1 ruamel_yaml 0.15.100 py38h2bbff1b_0 s3transfer 0.6.0 py38haa95532_0 scikit-image 0.19.2 py38hf11a4ad_0 scikit-learn 1.1.1 py38hd77b12b_0 scikit-learn-intelex 2021.5.0 py38haa95532_0 scipy 1.9.1 py38h91810f7_0 conda-forge scrapy 2.6.2 py38haa95532_0 seaborn 0.11.2 pyhd3eb1b0_0 send2trash 1.8.0 pyhd3eb1b0_1 service_identity 18.1.0 pyhd3eb1b0_1 setuptools 63.4.1 py38haa95532_0 silx 1.1.0a0 pypi_0 pypi sip 6.6.2 py38hd77b12b_0 six 1.16.0 pyhd3eb1b0_1 smart_open 5.2.1 py38haa95532_0 snappy 1.1.9 h6c2663c_0 sniffio 1.2.0 py38haa95532_1 snowballstemmer 2.2.0 pyhd3eb1b0_0 sortedcollections 2.1.0 pyhd3eb1b0_0 sortedcontainers 2.4.0 pyhd3eb1b0_0 soupsieve 2.3.1 pyhd3eb1b0_0 sphinx 5.0.2 py38haa95532_0 sphinxcontrib-applehelp 1.0.2 pyhd3eb1b0_0 sphinxcontrib-devhelp 1.0.2 pyhd3eb1b0_0 sphinxcontrib-htmlhelp 2.0.0 pyhd3eb1b0_0 sphinxcontrib-jsmath 1.0.1 pyhd3eb1b0_0 sphinxcontrib-qthelp 1.0.3 pyhd3eb1b0_0 sphinxcontrib-serializinghtml 1.1.5 pyhd3eb1b0_0 spyder 5.3.3 py38haa95532_0 spyder-kernels 2.3.3 py38haa95532_0 sqlalchemy 1.4.39 py38h2bbff1b_0 sqlite 3.39.3 h2bbff1b_0 stack_data 0.2.0 pyhd3eb1b0_0 statsmodels 0.13.2 py38h2bbff1b_0 sympy 1.10.1 py38haa95532_0 tabulate 0.8.10 py38haa95532_0 tbb 2021.5.0 h59b6b97_0 tbb4py 2021.5.0 py38h59b6b97_0 tblib 1.7.0 pyhd3eb1b0_0 tenacity 8.0.1 py38haa95532_1 terminado 0.13.1 py38haa95532_0 testpath 0.6.0 py38haa95532_0 text-unidecode 1.3 pyhd3eb1b0_0 textdistance 4.2.1 pyhd3eb1b0_0 threadpoolctl 2.2.0 pyh0d69192_0 three-merge 0.1.1 pyhd3eb1b0_0 tifffile 2021.7.2 pyhd3eb1b0_2 tinycss 0.4 pyhd3eb1b0_1002 tk 8.6.12 h2bbff1b_0 tldextract 3.2.0 pyhd3eb1b0_0 toml 0.10.2 pyhd3eb1b0_0 tomli 2.0.1 py38haa95532_0 tomlkit 0.11.1 py38haa95532_0 toolz 0.11.2 pyhd3eb1b0_0 tornado 6.2 py38h2bbff1b_0 tqdm 4.64.1 py38haa95532_0 traitlets 5.1.1 pyhd3eb1b0_0 twisted 22.2.0 py38h2bbff1b_1 twisted-iocpsupport 1.0.2 py38h2bbff1b_0 typed-ast 1.4.3 py38h2bbff1b_1 typing-extensions 4.3.0 py38haa95532_0 typing_extensions 4.3.0 py38haa95532_0 ucrt 10.0.20348.0 haa95532_0 ujson 5.4.0 py38hd77b12b_0 unidecode 1.2.0 pyhd3eb1b0_0 urllib3 1.26.11 py38haa95532_0 vc 14.2 h21ff451_1 vs2015_runtime 14.29.30139 h890b9b1_7 conda-forge w3lib 1.21.0 pyhd3eb1b0_0 watchdog 2.1.6 py38haa95532_0 wcwidth 0.2.5 pyhd3eb1b0_0 webencodings 0.5.1 py38_1 websocket-client 0.58.0 py38haa95532_4 werkzeug 2.0.3 pyhd3eb1b0_0 whatthepatch 1.0.2 py38haa95532_0 wheel 0.37.1 pyhd3eb1b0_0 widgetsnbextension 3.5.2 py38haa95532_0 win_inet_pton 1.1.0 py38haa95532_0 win_unicode_console 0.5 py38_0 wincertstore 0.2 py38haa95532_2 winpty 0.4.3 4 wrapt 1.14.1 py38h2bbff1b_0 xarray 0.20.1 pyhd3eb1b0_1 xlrd 2.0.1 pyhd3eb1b0_0 xlsxwriter 3.0.3 pyhd3eb1b0_0 xlwings 0.24.9 py38haa95532_0 xz 5.2.6 h8cc25b3_0 yaml 0.2.5 he774522_0 yapf 0.31.0 pyhd3eb1b0_0 yarl 1.8.1 py38h2bbff1b_0 zeromq 4.3.4 hd77b12b_0 zfp 1.0.0 h0e60522_1 conda-forge zict 2.1.0 py38haa95532_0 zipp 3.8.0 py38haa95532_0 zlib 1.2.12 h8cc25b3_3 zlib-ng 2.0.6 h8ffe710_0 conda-forge zope 1.0 py38_1 zope.interface 5.4.0 py38h2bbff1b_0 zstd 1.5.2 h19a0ad4_0
Or it is related to the graphics driver. Up to now I only encountered this issue on older AMD graphic units.
I also asked my co-workers to test this issue. Neither of them can reproduce this issue.
I cannot reproduce it either on windows 10, but I have not tried conda yet.