napari: Napari not working with dask distributed Client
What happened:
TypeError: can not serialize ‘function’ object
In distributed/client.py line 2635 futures = self._graph_to_futures
What you expected to happen:
successful image viewing
Minimal Complete Verifiable Example:
from dask.distributed import Client
import napari
import dask_image.imread as imread
client = Client()
data = imread('./myFiles/*.tif')
napari.view_image(data)
Anything else we need to know?: Works fine when not initializing client, i.e.
import napari
import dask_image.imread as imread
data = imread('./myFiles/*.tif')
napari.view_image(data)
works as expected
Environment:
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Napari/Dask version: dask 2021.2.0 pyhd8ed1ab_0 conda-forge dask-core 2021.2.0 pyhd8ed1ab_0 conda-forge dask-image 0.5.0 pyh44b312d_0 conda-forge distributed 2021.2.0 py39h6e9494a_0 conda-forge napari 0.4.5 pyhd8ed1ab_0 conda-forge napari-console 0.0.3 pyhd8ed1ab_0 conda-forge napari-plugin-engine 0.1.9 py39h6e9494a_1 conda-forge napari-svg 0.1.4 py_0 conda-forge
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Python version: python 3.9.2 h2502468_0_cpython conda-forge
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Operating System: OS X 11.2.1
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Install method (conda, pip, source): conda
About this issue
- Original URL
- State: closed
- Created 3 years ago
- Comments: 15 (12 by maintainers)
In particular would be good to test 0.4.0 to see if this works there as 0.5.0 started using
da.map_blocks
( https://github.com/dask/dask-image/pull/165 )here’s the full trace