basemap: Basemap install failing issue in MacOS

Hi, I tried to install Basemap via pip in Mac OS, but I have encountered an error. I also tried with another version (1.3.0), but those resulted in another error related to GEOS (it is installed and the environment variable is set correctly though).

Really appreciate your effort on this outstanding tool and thank you in advance for your support.

following is the log for installation of v 1.3.3:

$pip install basemap DEPRECATION: Configuring installation scheme with distutils config files is deprecated and will no longer work in the near future. If you are using a Homebrew or Linuxbrew Python, please see discussion at https://github.com/Homebrew/homebrew-core/issues/76621 Collecting basemap Using cached basemap-1.3.3.zip (155 kB) Installing build dependencies … error error: subprocess-exited-with-error

× pip subprocess to install build dependencies did not run successfully. │ exit code: 1 ╰─> [553 lines of output] Ignoring numpy: markers ‘python_version >= “3.10”’ don’t match your environment Ignoring numpy: markers ‘python_version == “2.6” or (python_version >= “3.2” and python_version <= “3.3”)’ don’t match your environment Ignoring cython: markers ‘python_version == “3.2”’ don’t match your environment Collecting setuptools Downloading setuptools-63.4.1-py3-none-any.whl (1.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 7.2 MB/s eta 0:00:00 Collecting wheel Using cached wheel-0.37.1-py2.py3-none-any.whl (35 kB) Collecting numpy==1.16.6 Using cached numpy-1.16.6.zip (5.1 MB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status ‘done’ Collecting cython<3.1,>=0.29 Using cached Cython-0.29.32-py2.py3-none-any.whl (986 kB) Building wheels for collected packages: numpy Building wheel for numpy (setup.py): started Building wheel for numpy (setup.py): finished with status ‘error’ error: subprocess-exited-with-error

    × python setup.py bdist_wheel did not run successfully.
    │ exit code: 1
    ╰─> [239 lines of output]
        Running from numpy source directory.
        /private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/misc_util.py:476: SyntaxWarning: "is" with a literal. Did you mean "=="?
          return is_string(s) and ('*' in s or '?' is s)
        blas_opt_info:
        blas_mkl_info:
        customize UnixCCompiler
          libraries mkl_rt not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        blis_info:
        customize UnixCCompiler
          libraries blis not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        openblas_info:
        customize UnixCCompiler
        customize UnixCCompiler
          libraries openblas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_3_10_blas_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries tatlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_3_10_blas_info:
        customize UnixCCompiler
          libraries satlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_blas_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_blas_info:
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        accelerate_info:
          FOUND:
            extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
            extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
            define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

          FOUND:
            extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
            extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
            define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

        /bin/sh: svnversion: command not found
        non-existing path in 'numpy/distutils': 'site.cfg'
        lapack_opt_info:
        lapack_mkl_info:
        customize UnixCCompiler
          libraries mkl_rt not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        openblas_lapack_info:
        customize UnixCCompiler
        customize UnixCCompiler
          libraries openblas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        openblas_clapack_info:
        customize UnixCCompiler
        customize UnixCCompiler
          libraries openblas,lapack not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_3_10_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries tatlas,tatlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries tatlas,tatlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries tatlas,tatlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
          NOT AVAILABLE

        atlas_3_10_info:
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries satlas,satlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries satlas,satlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries satlas,satlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_3_10_info'>
          NOT AVAILABLE

        atlas_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_threads_info'>
          NOT AVAILABLE

        atlas_info:
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_info'>
          NOT AVAILABLE

          FOUND:
            extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
            extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
            define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

        /usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'define_macros'
          warnings.warn(msg)
        running bdist_wheel
        running build
        running config_cc
        unifing config_cc, config, build_clib, build_ext, build commands --compiler options
        running config_fc
        unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
        running build_src
        build_src
        building py_modules sources
        creating build
        creating build/src.macosx-12-x86_64-3.9
        creating build/src.macosx-12-x86_64-3.9/numpy
        creating build/src.macosx-12-x86_64-3.9/numpy/distutils
        building library "npymath" sources
        get_default_fcompiler: matching types: '['gnu95', 'nag', 'absoft', 'ibm', 'intel', 'gnu', 'g95', 'pg']'
        customize Gnu95FCompiler
        Found executable /usr/local/bin/gfortran
        Traceback (most recent call last):
          File "<string>", line 2, in <module>
          File "<pip-setuptools-caller>", line 34, in <module>
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/setup.py", line 419, in <module>
            setup_package()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/setup.py", line 411, in setup_package
            setup(**metadata)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/core.py", line 171, in setup
            return old_setup(**new_attr)
          File "/usr/local/lib/python3.9/site-packages/setuptools/__init__.py", line 87, in setup
            return distutils.core.setup(**attrs)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 148, in setup
            return run_commands(dist)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 163, in run_commands
            dist.run_commands()
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 967, in run_commands
            self.run_command(cmd)
          File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 1229, in run_command
            super().run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
            cmd_obj.run()
          File "/usr/local/lib/python3.9/site-packages/wheel/bdist_wheel.py", line 299, in run
            self.run_command('build')
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 313, in run_command
            self.distribution.run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 1229, in run_command
            super().run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
            cmd_obj.run()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build.py", line 47, in run
            old_build.run(self)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/command/build.py", line 136, in run
            self.run_command(cmd_name)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 313, in run_command
            self.distribution.run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 1229, in run_command
            super().run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
            cmd_obj.run()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 148, in run
            self.build_sources()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 159, in build_sources
            self.build_library_sources(*libname_info)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 292, in build_library_sources
            sources = self.generate_sources(sources, (lib_name, build_info))
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 375, in generate_sources
            source = func(extension, build_dir)
          File "numpy/core/setup.py", line 665, in get_mathlib_info
            st = config_cmd.try_link('int main(void) { return 0;}')
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/command/config.py", line 241, in try_link
            self._check_compiler()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/config.py", line 80, in _check_compiler
            self.fcompiler = new_fcompiler(compiler=self.fcompiler,
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 884, in new_fcompiler
            compiler = get_default_fcompiler(plat, requiref90=requiref90,
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 855, in get_default_fcompiler
            compiler_type =  _find_existing_fcompiler(matching_compiler_types,
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 806, in _find_existing_fcompiler
            c.customize(dist)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 530, in customize
            linker_so_flags = self.flag_vars.linker_so
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/environment.py", line 40, in __getattr__
            return self._get_var(name, conf_desc)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/environment.py", line 56, in _get_var
            var = self._hook_handler(name, hook)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 709, in _environment_hook
            return hook()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/gnu.py", line 353, in get_flags_linker_so
            flags = GnuFCompiler.get_flags_linker_so(self)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/gnu.py", line 144, in get_flags_linker_so
            os.environ['MACOSX_DEPLOYMENT_TARGET'] = target
          File "/usr/local/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/os.py", line 684, in __setitem__
            value = self.encodevalue(value)
          File "/usr/local/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/os.py", line 756, in encode
            raise TypeError("str expected, not %s" % type(value).__name__)
        TypeError: str expected, not int
        [end of output]

    note: This error originates from a subprocess, and is likely not a problem with pip.
    ERROR: Failed building wheel for numpy
    Running setup.py clean for numpy
    error: subprocess-exited-with-error

    × python setup.py clean did not run successfully.
    │ exit code: 1
    ╰─> [10 lines of output]
        Running from numpy source directory.

        `setup.py clean` is not supported, use one of the following instead:

          - `git clean -xdf` (cleans all files)
          - `git clean -Xdf` (cleans all versioned files, doesn't touch
                              files that aren't checked into the git repo)

        Add `--force` to your command to use it anyway if you must (unsupported).

        [end of output]

    note: This error originates from a subprocess, and is likely not a problem with pip.
    ERROR: Failed cleaning build dir for numpy
  Failed to build numpy
  Installing collected packages: wheel, setuptools, numpy, cython
    Running setup.py install for numpy: started
    Running setup.py install for numpy: finished with status 'error'
    error: subprocess-exited-with-error

    × Running setup.py install for numpy did not run successfully.
    │ exit code: 1
    ╰─> [248 lines of output]
        Running from numpy source directory.

        Note: if you need reliable uninstall behavior, then install
        with pip instead of using `setup.py install`:

          - `pip install .`       (from a git repo or downloaded source
                                   release)
          - `pip install numpy`   (last NumPy release on PyPi)


        blas_opt_info:
        blas_mkl_info:
        customize UnixCCompiler
          libraries mkl_rt not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        blis_info:
        customize UnixCCompiler
          libraries blis not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        openblas_info:
        customize UnixCCompiler
        customize UnixCCompiler
          libraries openblas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_3_10_blas_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries tatlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_3_10_blas_info:
        customize UnixCCompiler
          libraries satlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_blas_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_blas_info:
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        accelerate_info:
          FOUND:
            extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
            extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
            define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

          FOUND:
            extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
            extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
            define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

        /bin/sh: svnversion: command not found
        non-existing path in 'numpy/distutils': 'site.cfg'
        lapack_opt_info:
        lapack_mkl_info:
        customize UnixCCompiler
          libraries mkl_rt not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        openblas_lapack_info:
        customize UnixCCompiler
        customize UnixCCompiler
          libraries openblas not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        openblas_clapack_info:
        customize UnixCCompiler
        customize UnixCCompiler
          libraries openblas,lapack not found in ['/usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib', '/usr/local/lib', '/usr/lib']
          NOT AVAILABLE

        atlas_3_10_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries tatlas,tatlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries tatlas,tatlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries tatlas,tatlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
          NOT AVAILABLE

        atlas_3_10_info:
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries satlas,satlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries satlas,satlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries satlas,satlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_3_10_info'>
          NOT AVAILABLE

        atlas_threads_info:
        Setting PTATLAS=ATLAS
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries ptf77blas,ptcblas,atlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_threads_info'>
          NOT AVAILABLE

        atlas_info:
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in /usr/local/opt/python@3.9/Frameworks/Python.framework/Versions/3.9/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in /usr/local/lib
        customize UnixCCompiler
          libraries lapack_atlas not found in /usr/lib
        customize UnixCCompiler
          libraries f77blas,cblas,atlas not found in /usr/lib
        <class 'numpy.distutils.system_info.atlas_info'>
          NOT AVAILABLE

          FOUND:
            extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
            extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
            define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

        /usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'define_macros'
          warnings.warn(msg)
        running install
        /usr/local/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
          warnings.warn(
        running build
        running config_cc
        unifing config_cc, config, build_clib, build_ext, build commands --compiler options
        running config_fc
        unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
        running build_src
        build_src
        building py_modules sources
        building library "npymath" sources
        get_default_fcompiler: matching types: '['gnu95', 'nag', 'absoft', 'ibm', 'intel', 'gnu', 'g95', 'pg']'
        customize Gnu95FCompiler
        Found executable /usr/local/bin/gfortran
        Traceback (most recent call last):
          File "<string>", line 2, in <module>
          File "<pip-setuptools-caller>", line 34, in <module>
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/setup.py", line 419, in <module>
            setup_package()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/setup.py", line 411, in setup_package
            setup(**metadata)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/core.py", line 171, in setup
            return old_setup(**new_attr)
          File "/usr/local/lib/python3.9/site-packages/setuptools/__init__.py", line 87, in setup
            return distutils.core.setup(**attrs)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 148, in setup
            return run_commands(dist)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 163, in run_commands
            dist.run_commands()
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 967, in run_commands
            self.run_command(cmd)
          File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 1229, in run_command
            super().run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
            cmd_obj.run()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/install.py", line 62, in run
            r = self.setuptools_run()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/install.py", line 36, in setuptools_run
            return distutils_install.run(self)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/command/install.py", line 670, in run
            self.run_command('build')
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 313, in run_command
            self.distribution.run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 1229, in run_command
            super().run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
            cmd_obj.run()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build.py", line 47, in run
            old_build.run(self)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/command/build.py", line 136, in run
            self.run_command(cmd_name)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 313, in run_command
            self.distribution.run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 1229, in run_command
            super().run_command(command)
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 986, in run_command
            cmd_obj.run()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 148, in run
            self.build_sources()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 159, in build_sources
            self.build_library_sources(*libname_info)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 292, in build_library_sources
            sources = self.generate_sources(sources, (lib_name, build_info))
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/build_src.py", line 375, in generate_sources
            source = func(extension, build_dir)
          File "numpy/core/setup.py", line 665, in get_mathlib_info
            st = config_cmd.try_link('int main(void) { return 0;}')
          File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/command/config.py", line 241, in try_link
            self._check_compiler()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/command/config.py", line 80, in _check_compiler
            self.fcompiler = new_fcompiler(compiler=self.fcompiler,
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 884, in new_fcompiler
            compiler = get_default_fcompiler(plat, requiref90=requiref90,
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 855, in get_default_fcompiler
            compiler_type =  _find_existing_fcompiler(matching_compiler_types,
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 806, in _find_existing_fcompiler
            c.customize(dist)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 530, in customize
            linker_so_flags = self.flag_vars.linker_so
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/environment.py", line 40, in __getattr__
            return self._get_var(name, conf_desc)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/environment.py", line 56, in _get_var
            var = self._hook_handler(name, hook)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/__init__.py", line 709, in _environment_hook
            return hook()
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/gnu.py", line 353, in get_flags_linker_so
            flags = GnuFCompiler.get_flags_linker_so(self)
          File "/private/var/folders/fc/29bg66sx4_x32gn5bfz_0fgh0000gn/T/pip-install-mnxg0uip/numpy_cdaa9579c1e345e6b85c29fc7af2b92d/numpy/distutils/fcompiler/gnu.py", line 144, in get_flags_linker_so
            os.environ['MACOSX_DEPLOYMENT_TARGET'] = target
          File "/usr/local/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/os.py", line 684, in __setitem__
            value = self.encodevalue(value)
          File "/usr/local/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/os.py", line 756, in encode
            raise TypeError("str expected, not %s" % type(value).__name__)
        TypeError: str expected, not int
        [end of output]

    note: This error originates from a subprocess, and is likely not a problem with pip.
  error: legacy-install-failure

  × Encountered error while trying to install package.
  ╰─> numpy

  note: This is an issue with the package mentioned above, not pip.
  hint: See above for output from the failure.
  WARNING: There was an error checking the latest version of pip.
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip. error: subprocess-exited-with-error

× pip subprocess to install build dependencies did not run successfully. │ exit code: 1 ╰─> See above for output.

note: This error originates from a subprocess, and is likely not a problem with pip. WARNING: There was an error checking the latest version of pip.

And, following is NumPy info: $pip show numpy Name: numpy Version: 1.23.1 Summary: NumPy is the fundamental package for array computing with Python. Home-page: https://www.numpy.org Author: Travis E. Oliphant et al. Author-email: License: BSD Location: /usr/local/lib/python3.9/site-packages Requires: Required-by: cftime, h5py, matplotlib, netCDF4, pandas, ray, scipy, wradlib, xarray

Next is pip, and python versions: $pip -V pip 22.1.1 from /usr/local/lib/python3.9/site-packages/pip (python 3.9)

About this issue

  • Original URL
  • State: closed
  • Created 2 years ago
  • Comments: 27 (16 by maintainers)

Most upvoted comments

So after downloading the file, I changed the filename: mv basemap-1.4.0.dev0-cp39-cp39-macosx_11_0_arm64.whl.zip basemap-1.4.0.dev0-cp39-cp39-macosx_11_0_arm64.whl

And then tried to run the first command in my environment with python version 3.9.7 and got this error back: Screenshot 2023-12-21 at 12 46 55 PM

+1
tamidodo on Dec 21, 2023

@tamidodo Sorry for the late reply, I was busier than expected. I attach here the current wheel file for Python 3.9 (you need to remove the .zip at the end after downloading): basemap-1.4.0.dev0-cp39-cp39-macosx_11_0_arm64.whl.zip

Since you are working with Anaconda, I would suggest to install this wheel without the dependencies, and afterwards install the dependencies manually with conda (to keep within the conda ecosystem as much as possible):

python -m pip install --no-deps basemap-1.4.0.dev0-cp39-cp39-macosx_11_0_arm64.whl
conda install numpy matplotlib pyproj pyshp packaging basemap-data

The wheel bundles its own precompiled GEOS dylib, which only depends on system libraries, so I hope it works for you without any tweaking. I am happy to hear any feedback from you!

+1
molinav on Dec 20, 2023

@molinav Now it works perfectly. Thank you very much. and I am willing to test your new builds in MacOS in the future. Thank you again, have a great weekend!

+1
SongJaeIn on Aug 6, 2022
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