Corrfunc: Build failure - related to avx512?

General information

• Corrfunc version: 2.3.3 or master
• platform: Linux
• installation method (pip/source/other?): pip or make

Issue description

Compile error

Expected behavior

Actual behavior

What have you tried so far?

$ git clone https://github.com/manodeep/Corrfunc/
Cloning into 'Corrfunc'...
[etc]
$ cd Corrfunc
$ make
mkdir -p lib
mkdir -p bin
mkdir -p include
make -C theory
make[1]: Entering directory '/tmp/Corrfunc/theory'

-------COMPILE SETTINGS------------
	 MAKE		 = ["make"]
	 CC		 = ["gcc"]
	 OPT		 = ["-DPERIODIC -DENABLE_MIN_SEP_OPT  -DCOPY_PARTICLES  -DUSE_OMP"]
	 CFLAGS		 = [" -DVERSION=\"2.3.3\" -DUSE_UNICODE -std=c99 -m64 -g -Wsign-compare -Wall -Wextra -Wshadow -Wunused -fPIC -D_POSIX_SOURCE=200809L -D_GNU_SOURCE -D_DARWIN_C_SOURCE -O3  -ftree-vectorize -funroll-loops -fprefetch-loop-arrays --param simultaneous-prefetches=4  -fopenmp -funroll-loops -march=native -fno-strict-aliasing -Wformat=2  -Wpacked  -Wnested-externs -Wpointer-arith  -Wredundant-decls  -Wfloat-equal -Wcast-qual -Wcast-align -Wmissing-declarations -Wmissing-prototypes  -Wnested-externs -Wstrict-prototypes   -Wno-unused-local-typedefs "]
	 CLINK		 = [" -lrt  -fopenmp -lm"]
	 PYTHON		 = ["python"]
	 GSL_CFLAGS	 = ["-I/cm/shared/apps/gsl/gsl-2.5/include"]
	 GSL_LINK	 = ["-L/cm/shared/apps/gsl/gsl-2.5/lib -lgsl -lgslcblas -lm -Xlinker -rpath -Xlinker /cm/shared/apps/gsl/gsl-2.5/lib"]
	 PYTHON_CFLAGS	 = ["-isystem/cm/shared/apps/conda-environments/python36/include/python3.6m -isystem /cm/shared/apps/conda-environments/python36/lib/python3.6/site-packages/numpy/core/include/numpy/"]
-------END OF COMPILE SETTINGS------------


make -C DD
make[2]: Entering directory '/tmp/Corrfunc/theory/DD'
gcc -DPERIODIC -DENABLE_MIN_SEP_OPT  -DCOPY_PARTICLES  -DUSE_OMP  -DVERSION=\"2.3.3\" -DUSE_UNICODE -std=c99 -m64 -g -Wsign-compare -Wall -Wextra -Wshadow -Wunused -fPIC -D_POSIX_SOURCE=200809L -D_GNU_SOURCE -D_DARWIN_C_SOURCE -O3  -ftree-vectorize -funroll-loops -fprefetch-loop-arrays --param simultaneous-prefetches=4  -fopenmp -funroll-loops -march=native -fno-strict-aliasing -Wformat=2  -Wpacked  -Wnested-externs -Wpointer-arith  -Wredundant-decls  -Wfloat-equal -Wcast-qual -Wcast-align -Wmissing-declarations -Wmissing-prototypes  -Wnested-externs -Wstrict-prototypes   -Wno-unused-local-typedefs  -I../../io -I../../utils  -c DD.c -o DD.o
gcc  -DVERSION=\"2.3.3\" -DUSE_UNICODE -std=c99 -m64 -g -Wsign-compare -Wall -Wextra -Wshadow -Wunused -fPIC -D_POSIX_SOURCE=200809L -D_GNU_SOURCE -D_DARWIN_C_SOURCE -O3  -ftree-vectorize -funroll-loops -fprefetch-loop-arrays --param simultaneous-prefetches=4  -fopenmp -funroll-loops -march=native -fno-strict-aliasing -Wformat=2  -Wpacked  -Wnested-externs -Wpointer-arith  -Wredundant-decls  -Wfloat-equal -Wcast-qual -Wcast-align -Wmissing-declarations -Wmissing-prototypes  -Wnested-externs -Wstrict-prototypes   -Wno-unused-local-typedefs  -I../../io -I../../utils  -c ../../io/ftread.c -o ../../io/ftread.o
gcc  -DVERSION=\"2.3.3\" -DUSE_UNICODE -std=c99 -m64 -g -Wsign-compare -Wall -Wextra -Wshadow -Wunused -fPIC -D_POSIX_SOURCE=200809L -D_GNU_SOURCE -D_DARWIN_C_SOURCE -O3  -ftree-vectorize -funroll-loops -fprefetch-loop-arrays --param simultaneous-prefetches=4  -fopenmp -funroll-loops -march=native -fno-strict-aliasing -Wformat=2  -Wpacked  -Wnested-externs -Wpointer-arith  -Wredundant-decls  -Wfloat-equal -Wcast-qual -Wcast-align -Wmissing-declarations -Wmissing-prototypes  -Wnested-externs -Wstrict-prototypes   -Wno-unused-local-typedefs  -I../../io -I../../utils  -c ../../io/io.c -o ../../io/io.o
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  ../../utils/weight_defs.h.src >> ../../utils/weight_defs_double.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  countpairs_impl.h.src >> countpairs_impl_double.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g"  ../../utils/weight_defs.h.src >> ../../utils/weight_defs_float.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g"  countpairs_impl.h.src >> countpairs_impl_float.h
gcc  -DVERSION=\"2.3.3\" -DUSE_UNICODE -std=c99 -m64 -g -Wsign-compare -Wall -Wextra -Wshadow -Wunused -fPIC -D_POSIX_SOURCE=200809L -D_GNU_SOURCE -D_DARWIN_C_SOURCE -O3  -ftree-vectorize -funroll-loops -fprefetch-loop-arrays --param simultaneous-prefetches=4  -fopenmp -funroll-loops -march=native -fno-strict-aliasing -Wformat=2  -Wpacked  -Wnested-externs -Wpointer-arith  -Wredundant-decls  -Wfloat-equal -Wcast-qual -Wcast-align -Wmissing-declarations -Wmissing-prototypes  -Wnested-externs -Wstrict-prototypes   -Wno-unused-local-typedefs  -I../../io -I../../utils  -c countpairs.c -o countpairs.o
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g" countpairs_kernels.c.src >> countpairs_kernels_float.c
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  countpairs_kernels.c.src >> countpairs_kernels_double.c
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g"  ../../utils/gridlink_impl.h.src >> ../../utils/gridlink_impl_float.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  ../../utils/gridlink_impl.h.src >> ../../utils/gridlink_impl_double.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g"  ../../utils/gridlink_utils.h.src >> ../../utils/gridlink_utils_float.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  ../../utils/gridlink_utils.h.src >> ../../utils/gridlink_utils_double.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g"  ../../utils/cellarray.h.src >> ../../utils/cellarray_float.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  ../../utils/cellarray.h.src >> ../../utils/cellarray_double.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g"  ../../utils/cell_pair.h.src >> ../../utils/cell_pair_float.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  ../../utils/cell_pair.h.src >> ../../utils/cell_pair_double.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  ../../utils/weight_functions.h.src >> ../../utils/weight_functions_double.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/float/g"  ../../utils/weight_functions.h.src >> ../../utils/weight_functions_float.h
sed -e "/DOUBLE_PREC/!s/DOUBLE/double/g"  countpairs_impl.c.src >> countpairs_impl_double.c
gcc -DDOUBLE_PREC  -DVERSION=\"2.3.3\" -DUSE_UNICODE -std=c99 -m64 -g -Wsign-compare -Wall -Wextra -Wshadow -Wunused -fPIC -D_POSIX_SOURCE=200809L -D_GNU_SOURCE -D_DARWIN_C_SOURCE -O3  -ftree-vectorize -funroll-loops -fprefetch-loop-arrays --param simultaneous-prefetches=4  -fopenmp -funroll-loops -march=native -fno-strict-aliasing -Wformat=2  -Wpacked  -Wnested-externs -Wpointer-arith  -Wredundant-decls  -Wfloat-equal -Wcast-qual -Wcast-align -Wmissing-declarations -Wmissing-prototypes  -Wnested-externs -Wstrict-prototypes   -Wno-unused-local-typedefs  -I../../io -I../../utils  -c countpairs_impl_double.c -o countpairs_impl_double.o
In file included from /usr/lib/gcc/x86_64-linux-gnu/5/include/immintrin.h:43:0,
                 from ../../utils/avx512_calls.h:16,
                 from ../../utils/weight_functions_double.h:12,
                 from countpairs_kernels_double.c:23,
                 from countpairs_impl_double.c:21:
/usr/lib/gcc/x86_64-linux-gnu/5/include/avx2intrin.h: In function ‘countpairs_avx512_intrinsics_double’:
/usr/lib/gcc/x86_64-linux-gnu/5/include/avx2intrin.h:973:20: error: the last argument must be an 8-bit immediate
   return (__m256i) __builtin_ia32_pblendd256 ((__v8si)__X,
                    ^
../../rules.mk:61: recipe for target 'countpairs_impl_double.o' failed
make[2]: *** [countpairs_impl_double.o] Error 1

System information:

$ head -n 2 /etc/os-release
NAME="Ubuntu"
VERSION="16.04.6 LTS (Xenial Xerus)"
$ make -v
GNU Make 4.1
...
$ gcc --version
gcc (Ubuntu 5.5.0-12ubuntu1~16.04) 5.5.0 20171010
...
$ pkg-config --modversion gsl
2.5
$ python --version
Python 3.6.0 :: Continuum Analytics, Inc.
$ which python
/cm/shared/apps/conda-environments/python36/bin/python
$ cat /proc/cpuinfo
processor       : 0
vendor_id       : GenuineIntel
cpu family      : 6
model           : 85
model name      : Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
stepping        : 4
microcode       : 0x2000064
cpu MHz         : 2683.513
cache size      : 14080 KB
physical id     : 0
siblings        : 20
core id         : 0
cpu cores       : 10
apicid          : 0
initial apicid  : 0
fpu             : yes
fpu_exception   : yes
cpuid level     : 22
wp              : yes
flags           : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 cdp_l3 invpcid_single pti intel_ppin ssbd mba ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm cqm mpx rdt_a avx512f avx512dq rdseed adx smap clflushopt clwb intel_pt avx512cd avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local dtherm ida arat pln pts pku ospke flush_l1d
bugs            : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf
bogomips        : 4400.00
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

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