ITKElastix: Unable to run example notebooks

Attempting to run the example notebooks causes the kernel to die when executing the registration step.

After running into issues attempting my own registrations, I gave the examples a try without any luck. Not sure that the issues are necessarily related, but figured I’d start here with the examples.

I’m using the python package for itk: itk 5.1.0.post3 (<-- perhaps this is the issue???) and the most recent ITKElastix (0.6.2).

Perhaps I’m missing something simple, but any help, tips, or guidance is appreciated! Thanks!

About this issue

  • Original URL
  • State: closed
  • Created 4 years ago
  • Comments: 27 (12 by maintainers)

Most upvoted comments

Yes, I tried that on this branch of elastix, but running an ITKElastix package build with that branch gave exactly the same errors and backtrace. I also tried including the same macro definition in the CMakeList.txt of elastix, but again I got the same errors and backtrace. Also changing the dynamic casts in elxElastixTemplate.hxx to static casts, didn’t change anything. @N-Dekker

Strange… I’m on macOS High Sierra 1013.6, using python 3.7.3 through pyenv, and 2.5 GHz Intel Core i7 processor.