duckdb: Pip Install fails in Docker python:3.9.7
What happens?
Pip install fails in Docker container. On pip install I get
ERROR: Failed building wheel for duckdb
Running setup.py clean for duckdb
Failed to build duckdb
The fall back setup.py install fails because of a numpy dep. I don’t know enough about pip but I imagine there is an issue with building the python module from source?
To Reproduce
Dockerfile:
FROM python:3.9.7
# Install VIM and Bash completion
RUN apt-get update && apt-get install -y \
build-essential \
vim \
bash-completion \
git \
curl \
--no-install-recommends \
ca-certificates \
&& \
apt-get clean
# Install Python Requirements
RUN pip3 install -U pip
RUN pip3 install -U wheel
RUN pip3 install -U setuptools
RUN pip install -r requirements.txt
requirements.txt:
# Maths
numpy~=1.21.3
pandas~=1.3.4
# Serving
Flask~=2.1.2
# DB
duckdb~=0.3.4
# APIs
boto3~=1.19.6
requests~=2.22.0
# Lint
black~=22.3.0
Docker commands
docker image build -t duckdb-image:1.0 -f Dockerfile .
docker run duckdb-image:1.0
I’ve tried replacing the requirements install with just pip3 install duckdb --upgrade --pre which works until I try to install my dependancies list after
RUN pip3 install duckdb --upgrade --pre
RUN pip3 install -r requirements.txt # without duckdb
#12 0.666 × python setup.py egg_info did not run successfully.
#12 0.666 │ exit code: 1
#12 0.666 ╰─> [6 lines of output]
#12 0.666 Traceback (most recent call last):
#12 0.666 File "<string>", line 2, in <module>
#12 0.666 File "<pip-setuptools-caller>", line 34, in <module>
#12 0.666 File "/tmp/pip-install-h6vp8k2o/maths_93c88328b7e9410290fd880eec8b934f/setup.py", line 5, in <module>
#12 0.666 version=open('VERSION').read().strip(),
#12 0.666 FileNotFoundError: [Errno 2] No such file or directory: 'VERSION'
#12 0.666 [end of output]
Environment (please complete the following information):
- OS: Mac 12.4 running Docker python:3.9.7
- DuckDB Version: 0.3.4
- DuckDB Client: Python
Before Submitting
- [X ] Have you tried this on the latest
masterbranch?
- Python:
pip install duckdb --upgrade --pre - R:
install.packages("https://github.com/duckdb/duckdb/releases/download/master-builds/duckdb_r_src.tar.gz", repos = NULL) - Other Platforms: You can find binaries here or compile from source.
- [X ] Have you tried the steps to reproduce? Do they include all relevant data and configuration? Does the issue you report still appear there?
About this issue
- Original URL
- State: closed
- Created 2 years ago
- Reactions: 1
- Comments: 15 (7 by maintainers)
I had the same error with
0.5.1, but I also tried0.5.0, and0.4.0. All with the same error above when runningdocker build. RUN pip3 install duckdb --upgrade --pre` didn’t work either.I tried different docker base images and different python versions. All with the same error.