ClickHouse: Failed to build with gcc-9 on macOS Catalina

Operating system

Mac OS X 10.15.1 Catalina (19B88)

Cmake version

3.15.4

Ninja version

1.9.0

Compiler name and version

gcc Homebrew GCC 9.2.0_1

Full cmake and/or ninja output

% cmake … -DCMAKE_CXX_COMPILER=which g++-9 -DCMAKE_C_COMPILER=which gcc-9 – The C compiler identification is GNU 9.2.0 – The CXX compiler identification is GNU 9.2.0 – Checking whether C compiler has -isysroot – Checking whether C compiler has -isysroot - yes – Checking whether C compiler supports OSX deployment target flag – Checking whether C compiler supports OSX deployment target flag - yes – Check for working C compiler: /usr/local/bin/gcc-9 – Check for working C compiler: /usr/local/bin/gcc-9 – works – Detecting C compiler ABI info – Detecting C compiler ABI info - done – Detecting C compile features – Detecting C compile features - done – Checking whether CXX compiler has -isysroot – Checking whether CXX compiler has -isysroot - yes – Checking whether CXX compiler supports OSX deployment target flag – Checking whether CXX compiler supports OSX deployment target flag - yes – Check for working CXX compiler: /usr/local/bin/g+±9 – Check for working CXX compiler: /usr/local/bin/g+±9 – works – Detecting CXX compiler ABI info – Detecting CXX compiler ABI info - done – Detecting CXX compile features – Detecting CXX compile features - done – IPO/LTO not enabled. – CMAKE_BUILD_TYPE is not set, set to default = RELWITHDEBINFO – CMAKE_BUILD_TYPE: RELWITHDEBINFO – Performing Test HAVE_SSE41 – Performing Test HAVE_SSE41 - Success – Performing Test HAVE_SSE42 – Performing Test HAVE_SSE42 - Success – Performing Test HAVE_SSSE3 – Performing Test HAVE_SSSE3 - Success – Performing Test HAVE_AVX – Performing Test HAVE_AVX - Success – Performing Test HAVE_AVX2 – Performing Test HAVE_AVX2 - Success – Performing Test HAVE_POPCNT – Performing Test HAVE_POPCNT - Success – Looking for pthread.h – Looking for pthread.h - found – Performing Test CMAKE_HAVE_LIBC_PTHREAD – Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success – Found Threads: TRUE – Performing Test HAVE_NO_PIE – Performing Test HAVE_NO_PIE - Failed – Tests are enabled – Building for: Darwin-19.0.0 x86_64 ; USE_STATIC_LIBRARIES=ON MAKE_STATIC_LIBRARIES=ON SPLIT_SHARED= UNBUNDLED=OFF CCACHE=CCACHE_FOUND-NOTFOUND – Using ssl=1: ~/ClickHouse/contrib/ssl/include : ssl;crypto – The following ICU libraries were not found: – i18n (required) – uc (required) – data (required) – Failed to find all ICU components (missing: ICU_INCLUDE_DIR ICU_LIBRARY _ICU_REQUIRED_LIBS_FOUND) – Build without ICU (support for collations and charset conversion functions will be disabled) – Using Boost: ~/ClickHouse/contrib/boost : boost_program_options_internal,boost_system_internal,boost_filesystem_internal;boost_system_internal,boost_regex_internal – Using zlib-ng: ~/ClickHouse/contrib/zlib-ng;~/ClickHouse/build/contrib/zlib-ng : zlibstatic – Using zstd: ~/ClickHouse/contrib/zstd/lib : zstd – Using termcap: /usr/lib/libtermcap.dylib – Using odbc=: : – Using Poco: ~/ClickHouse/contrib/poco/Foundation/include/;~/ClickHouse/contrib/poco/Util/include/;~/ClickHouse/contrib/zlib-ng/;~/ClickHouse/build/contrib/zlib-ng/ : PocoFoundation,PocoUtil,PocoNet,PocoNetSSL;ssl;crypto,PocoCrypto;ssl;crypto,PocoXML,PocoData,PocoMongoDB; MongoDB=1, DataODBC=, NetSSL=1 – Using lz4: ~/ClickHouse/contrib/lz4/lib : lz4 – Using xxhash=1: ~/ClickHouse/contrib/lz4/lib : lz4 – Using sparsehash: ~/ClickHouse/contrib/libsparsehash – Using rt: apple_rt – Using line editing libraries (readline): /usr/local/opt/readline/include : /usr/local/opt/readline/lib/libreadline.a;/usr/lib/libtermcap.dylib – Performing Test HAVE_READLINE_HISTORY – Performing Test HAVE_READLINE_HISTORY - Success – Using re2: ~/ClickHouse/contrib/re2 : re2; : re2_st – Using librdkafka=: : – Using capnp=1: ~/ClickHouse/contrib/capnproto/c++/src : capnpc – Using cpuid=1: ~/ClickHouse/contrib/libcpuid/include : cpuid – Using libgsasl: LIBGSASL_INCLUDE_DIR-NOTFOUND : LIBGSASL_LIBRARY-NOTFOUND – Using libxml2: ~/ClickHouse/contrib/libxml2/include;~/ClickHouse/contrib/libxml2-cmake/linux_x86_64/include : libxml2 – Using brotli=1: ~/ClickHouse/contrib/brotli/c/include : brotli – Using protobuf=1: ~/ClickHouse/contrib/protobuf/src : libprotobuf – Using pdqsort: ~/ClickHouse/contrib/pdqsort – Using hdfs3=: : – Using consistent-hashing: : consistent-hashing – Using hyperscan=1: ~/ClickHouse/contrib/hyperscan/src : hs – Using cityhash: : cityhash – Using farmhash: : farmhash – Using metrohash: ~/ClickHouse/contrib/libmetrohash/src : metrohash – Using btrie: : btrie – Using double-conversion: ~/ClickHouse/contrib/double-conversion : double-conversion – Using snappy=1: ~/ClickHouse/contrib/snappy : snappy – Using Parquet: arrow_static: ; parquet_static: ; thrift_static – Using gtest=1: ~/ClickHouse/contrib/googletest/googletest : gtest_main;gtest : – Using cctz: ~/ClickHouse/contrib/cctz/include : cctz – Build without mysqlclient (support for MYSQL dictionary source will be disabled) – Performing Test HAVE_UNW_INIT_LOCAL2 – Performing Test HAVE_UNW_INIT_LOCAL2 - Failed – Using unwind=: : – compiler C = /usr/local/bin/gcc-9 -fdiagnostics-color=always -pipe -msse4.1 -msse4.2 -mpopcnt -fno-omit-frame-pointer -Wall -O2 -g -DNDEBUG -O3 – compiler CXX = /usr/local/bin/g+±9 -fdiagnostics-color=always -pipe -msse4.1 -msse4.2 -mpopcnt -fno-omit-frame-pointer -Wall -Wnon-virtual-dtor -O2 -g -DNDEBUG -O3 – LINKER_FLAGS = – ZSTD VERSION 1.3.17 – Looking for sys/types.h – Looking for sys/types.h - found – Looking for stdint.h – Looking for stdint.h - found – Looking for stddef.h – Looking for stddef.h - found – Architecture: x86_64 – Check size of off64_t – Check size of off64_t - failed – Check size of _off64_t – Check size of _off64_t - failed – Check size of __off64_t – Check size of __off64_t - failed – Looking for fseeko – Looking for fseeko - found – Looking for strerror – Looking for strerror - found – Looking for unistd.h – Looking for unistd.h - found – Looking for stdarg.h – Looking for stdarg.h - found – Performing Test HAVE_ATTRIBUTE_VISIBILITY_HIDDEN – Performing Test HAVE_ATTRIBUTE_VISIBILITY_HIDDEN - Success – Performing Test HAVE_ATTRIBUTE_VISIBILITY_INTERNAL – Performing Test HAVE_ATTRIBUTE_VISIBILITY_INTERNAL - Success – Performing Test HAVE_BUILTIN_CTZL – Performing Test HAVE_BUILTIN_CTZL - Success – Performing Test HAVE_SSE2_INTRIN – Performing Test HAVE_SSE2_INTRIN - Success – Performing Test HAVE_SSE42_INTRIN – Performing Test HAVE_SSE42_INTRIN - Success – Performing Test HAVE_SSE42CRC_INTRIN – Performing Test HAVE_SSE42CRC_INTRIN - Success – Performing Test HAVE_PCLMULQDQ_INTRIN – Performing Test HAVE_PCLMULQDQ_INTRIN - Success – Performing Test MFPU_NEON_AVAILABLE – Performing Test MFPU_NEON_AVAILABLE - Failed – Architecture-specific source files: arch/x86/x86.c;arch/x86/insert_string_sse.c;arch/x86/deflate_quick.c;arch/x86/fill_window_sse.c;arch/x86/crc_folding.c;arch/x86/crc_pclmulqdq.c – The following features have been enabled:

• CMAKE_BUILD_TYPE, Build type: RELWITHDEBINFO (selected)
• ZLIB_COMPAT, Provide a zlib-compatible API
• WITH_GZFILEOP, Compile with support for gzFile-related functions
• WITH_OPTIM, Build with optimisation
• WITH_NEW_STRATEGIES, Use new strategies
• SSE2, Use the SSE2 instruction set, using “-msse2”
• SSE4_CRC, Support CRC hash generation using the SSE4.2 instruction set, using “-msse4”
• SSE4DEFLATE, Support SSE4.2-accelerated quick decompression
• PCLMUL_CRC, Support CRC hash generation using PCLMULQDQ, using “-mpclmul”

– The following OPTIONAL packages have been found:

• Threads

– The following OPTIONAL packages have not been found:

• ICU

– Looking for asprintf – Looking for asprintf - found – Looking for inet_pton – Looking for inet_pton - found – Looking for strcasecmp – Looking for strcasecmp - found – Looking for strlcat – Looking for strlcat - found – Looking for strlcpy – Looking for strlcpy - found – Looking for strndup – Looking for strndup - found – Looking for strnlen – Looking for strnlen - found – Looking for strsep – Looking for strsep - found – Looking for timegm – Looking for timegm - found – Looking for arc4random_buf – Looking for arc4random_buf - found – Looking for arc4random_uniform – Looking for arc4random_uniform - found – Looking for explicit_bzero – Looking for explicit_bzero - not found – Looking for getpagesize – Looking for getpagesize - found – Looking for timingsafe_bcmp – Looking for timingsafe_bcmp - found – Looking for timingsafe_memcmp – Looking for timingsafe_memcmp - not found – Looking for memmem – Looking for memmem - found – Looking for include file err.h – Looking for include file err.h - found – Check size of time_t – Check size of time_t - done – Looking for C++ include initializer_list – Looking for C++ include initializer_list - found – Found ZLIB: /usr/lib/libz.dylib – Check if the system is big endian – Searching 16 bit integer – Check size of unsigned short – Check size of unsigned short - done – Using unsigned short – Check if the system is big endian - little endian – Looking for byteswap.h – Looking for byteswap.h - not found – Looking for sys/endian.h – Looking for sys/endian.h - not found – Looking for sys/mman.h – Looking for sys/mman.h - found – Looking for sys/resource.h – Looking for sys/resource.h - found – Looking for sys/time.h – Looking for sys/time.h - found – Looking for sys/uio.h – Looking for sys/uio.h - found – Looking for unistd.h – Looking for unistd.h - found – Looking for windows.h – Looking for windows.h - not found – Looking for zlibVersion in z – Looking for zlibVersion in z - found – Looking for lzo1x_1_15_compress in lzo2 – Looking for lzo1x_1_15_compress in lzo2 - not found – Performing Test HAVE_VISUAL_STUDIO_ARCH_AVX – Performing Test HAVE_VISUAL_STUDIO_ARCH_AVX - Failed – Performing Test HAVE_VISUAL_STUDIO_ARCH_AVX2 – Performing Test HAVE_VISUAL_STUDIO_ARCH_AVX2 - Failed – Performing Test HAVE_CLANG_MAVX – Performing Test HAVE_CLANG_MAVX - Success – Performing Test HAVE_CLANG_MBMI2 – Performing Test HAVE_CLANG_MBMI2 - Success – Performing Test HAVE_BUILTIN_EXPECT – Performing Test HAVE_BUILTIN_EXPECT - Success – Performing Test HAVE_BUILTIN_CTZ – Performing Test HAVE_BUILTIN_CTZ - Success – Performing Test SNAPPY_HAVE_SSSE3 – Performing Test SNAPPY_HAVE_SSSE3 - Success – Performing Test SNAPPY_HAVE_BMI2 – Performing Test SNAPPY_HAVE_BMI2 - Failed – Looking for mmap – Looking for mmap - found – Looking for sysconf – Looking for sysconf - found – Looking for arpa/inet.h – Looking for arpa/inet.h - found – Looking for fcntl.h – Looking for fcntl.h - found – Looking for getopt.h – Looking for getopt.h - found – Looking for inttypes.h – Looking for inttypes.h - found – Looking for netdb.h – Looking for netdb.h - found – Looking for netinet/in.h – Looking for netinet/in.h - found – Looking for signal.h – Looking for signal.h - found – Looking for pthread.h – Looking for pthread.h - found – Looking for sys/ioctl.h – Looking for sys/ioctl.h - found – Looking for sys/param.h – Looking for sys/param.h - found – Looking for sys/socket.h – Looking for sys/socket.h - found – Looking for sys/stat.h – Looking for sys/stat.h - found – Looking for sys/un.h – Looking for sys/un.h - found – Looking for poll.h – Looking for poll.h - found – Looking for sys/poll.h – Looking for sys/poll.h - found – Looking for sys/select.h – Looking for sys/select.h - found – Looking for sched.h – Looking for sched.h - found – Looking for string.h – Looking for string.h - found – Looking for strings.h – Looking for strings.h - found – Looking for gethostbyname – Looking for gethostbyname - found – Looking for gethostbyname_r – Looking for gethostbyname_r - not found – Looking for strerror_r – Looking for strerror_r - found – Looking for sched_get_priority_max – Looking for sched_get_priority_max - found – Looking for sched_get_priority_min – Looking for sched_get_priority_min - found – Performing Test STRERROR_R_CHAR_P – Performing Test STRERROR_R_CHAR_P - Failed – Using OpenSSL from ~/ClickHouse/contrib/ssl – Using odbc: : – Found PythonInterp: /usr/local/bin/python (found version “2.7.17”) – Performing Test ARCH_64_BIT – Performing Test ARCH_64_BIT - Success – Performing Test ARCH_32_BIT – Performing Test ARCH_32_BIT - Failed – Build type RELWITHDEBINFO – Boost version: 1.71.0 – Build date: 2019-10-30 – gcc version 9.2.0 CMake Error at contrib/hyperscan/CMakeLists.txt:205 (message): Something went wrong determining gcc tune: -mtune=option: not valid

– g++ version 9.2.0 – Looking for include file intrin.h – Looking for include file intrin.h - not found – Looking for C++ include intrin.h – Looking for C++ include intrin.h - not found – Looking for include file x86intrin.h – Looking for include file x86intrin.h - found – Looking for C++ include x86intrin.h – Looking for C++ include x86intrin.h - found – Looking for posix_memalign – Looking for posix_memalign - found – Looking for _aligned_malloc – Looking for _aligned_malloc - not found – Performing Test HAS_C_HIDDEN – Performing Test HAS_C_HIDDEN - Success – Performing Test HAS_CXX_HIDDEN – Performing Test HAS_CXX_HIDDEN - Success – Looking for _LIBCPP_VERSION – Looking for _LIBCPP_VERSION - not found – Performing Test HAVE_AVX512 – Performing Test HAVE_AVX512 - Failed – Building without AVX512 support – Performing Test HAVE_CC_BUILTIN_ASSUME_ALIGNED – Performing Test HAVE_CC_BUILTIN_ASSUME_ALIGNED - Success – Performing Test HAVE_CXX_BUILTIN_ASSUME_ALIGNED – Performing Test HAVE_CXX_BUILTIN_ASSUME_ALIGNED - Success – Performing Test HAVE__BUILTIN_CONSTANT_P – Performing Test HAVE__BUILTIN_CONSTANT_P - Success – Performing Test C_FLAG_Wvla – Performing Test C_FLAG_Wvla - Success – Performing Test C_FLAG_Wpointer_arith – Performing Test C_FLAG_Wpointer_arith - Success – Performing Test C_FLAG_Wstrict_prototypes – Performing Test C_FLAG_Wstrict_prototypes - Success – Performing Test C_FLAG_Wmissing_prototypes – Performing Test C_FLAG_Wmissing_prototypes - Success – Performing Test CXX_FLAG_Wvla – Performing Test CXX_FLAG_Wvla - Success – Performing Test CXX_FLAG_Wpointer_arith – Performing Test CXX_FLAG_Wpointer_arith - Success – Performing Test CC_SELF_ASSIGN – Performing Test CC_SELF_ASSIGN - Failed – Performing Test CXX_SELF_ASSIGN – Performing Test CXX_SELF_ASSIGN - Failed – Performing Test CC_PAREN_EQUALITY – Performing Test CC_PAREN_EQUALITY - Failed – Performing Test CXX_UNUSED_CONST_VAR – Performing Test CXX_UNUSED_CONST_VAR - Success – Performing Test CXX_IGNORED_ATTR – Performing Test CXX_IGNORED_ATTR - Success – Performing Test CXX_WEAK_VTABLES – Performing Test CXX_WEAK_VTABLES - Failed – Performing Test CXX_MISSING_DECLARATIONS – Performing Test CXX_MISSING_DECLARATIONS - Success – Performing Test CXX_UNUSED_LOCAL_TYPEDEFS – Performing Test CXX_UNUSED_LOCAL_TYPEDEFS - Success – Performing Test CXX_WUNUSED_VARIABLE – Performing Test CXX_WUNUSED_VARIABLE - Success – Building for current host CPU: – Looking for mmap – Looking for mmap - found – Doxygen not found, unable to generate API reference – Found PkgConfig: /usr/local/bin/pkg-config (found version “0.29.2”) – Checking for module ‘libpcre>=8.41’ – Found libpcre, version 8.43 – PCRE version 8.41 or above CMake Warning at libs/libcommon/CMakeLists.txt:80 (message): Non default allocator is disabled. This is not recommended for production Linux builds.

– ~/ClickHouse/utils: Have 10035 megabytes of memory. Limiting concurrent linkers jobs to 2 and compiler jobs to OFF – ~/ClickHouse/dbms: Have 10035 megabytes of memory. Limiting concurrent linkers jobs to 2 and compiler jobs to 4 – Will build ClickHouse 19.5.3.1 revision 54417 – Using internal= compiler=: headers=/usr/share/clickhouse/headers/19.5.3.1 : /usr/local/bin/clickhouse-clang -fdiagnostics-color=always -pipe -msse4.1 -msse4.2 -mpopcnt -fno-omit-frame-pointer -Wall -Wnon-virtual-dtor -Wextra -Werror -O2 -g -DNDEBUG -O3 -std=c++1z -x c++ -march=native -fPIC -fvisibility=hidden -fno-implement-inlines -nostdinc -nostdinc++ -Wno-unused-command-line-argument -Bprefix=/usr/share/clickhouse -isysroot=/usr/share/clickhouse/headers/19.5.3.1; clickhouse-lld – Target check already exists – Configuring incomplete, errors occurred!